// Single SMAP to ThunderSTORM script by Christophe Leterrier
// calls F-SMAPTranslate.js

importClass(Packages.ij.io.OpenDialog)
importClass(Packages.java.io.File)
importClass(Packages.ij.IJ);
importClass(Packages.ij.gui.GenericDialog);

var od = new OpenDialog("Choose a SMAP csv file", "");
var directory = od.getDirectory();
var name = od.getFileName();
var path = directory + name;
IJ.log("\nTranslator input file path:" + path);

var plugDir = IJ.getDirectory("imagej");
plugDir = plugDir + "scripts" + File.separator + "NeuroCyto" + File.separator + "added macros" + File.separator + "ChriSTORM extras" + File.separator;
var translateJS = "F-SMAPTranslate.js";
var translatePath = plugDir + translateJS;
IJ.log("Translator path:" + plugDir + translateJS);
load(translatePath);

SMAPTranslate(path, directory);
IJ.log("Single SMAP to TS end");